C-PATu

C-PATu 

• Update (01/09/2012) 
• PURPOSE: R code that performs parent-of-origin tests in the presence of association using complete and incomplete nuclear families, where only one nuclear family was selected from each pedigree at random and both affected and unaffected children in each nuclear family were included in the analysis.
• Source R code: C-PATu.R
• Sample pedigree file: ped.txt
• Reference: 

Ji-Yuan Zhou, Wei-Gao Mao, Dan-Ling Li, Yue-Qing Hu, Fan Xia and Wing Kam Fung. A powerful parent-of-origin effects test for qualitative traits incorporating control children in nuclear families. Journal of Human Genetics. 2012, 57(8):500-507.